Description

R script that scores output from multiple runs of hmmer/hmmsearch

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:'sample1' ]

tblouts:file

table outputs from hmmsearch

*.tsv.gz

Output

name:type
description
pattern

hmmrank

meta:map

Groovy Map containing sample information e.g. [ id:'sample1' ]

*.hmmrank.tsv.gz:file

TSV file with ranked hmmer results

*.hmmrank.tsv.gz

versions

versions.yml:file

File containing software versions

versions.yml

Tools

R
GPL v2

A Language and Environment for Statistical Computing

Tidyverse
MIT

Tidyverse: R packages for data science